BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021B11LP1|AL427725
(916 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1531 1773 0.0
>3x_Contig1531
Length = 8774
Score = 1773 bits (893), Expect = 0.0
Identities = 911/915 (99%), Gaps = 2/915 (0%)
Strand = Plus / Plus
Query: 3 cttagttaagcaagccaagtctagacaaaagattttggacaaaatggaagcggatggttt 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4131 cttagttaagcaagccaagtctagacaaaagattttggacaaaatggaagcggatggttt 4190
Query: 63 gattcaaccagttgctgccgacaaggtcttctccttcagattcccagaggttgaaagatt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4191 gattcaaccagttgctgccgacaaggtcttctccttcagattcccagaggttgaaagatt 4250
Query: 123 accacctccagttttggcattcgatgatatttccttctcttacgatggtaactcagaaaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4251 accacctccagttttggcattcgatgatatttccttctcttacgatggtaactcagaaaa 4310
Query: 183 caacctatacgaacatttagactttggtgttgatatggactctagaattgctttagtcgg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4311 caacctatacgaacatttagactttggtgttgatatggactctagaattgctttagtcgg 4370
Query: 243 tccaaatggtgttggtaaatctactttgttgaagattatgactggtcaattgaccactca 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4371 tccaaatggtgttggtaaatctactttgttgaagattatgactggtcaattgaccactca 4430
Query: 303 aagcggtcgtgtttccagacacagtcacgtcaagttgggtgtttactcccaacattctca 362
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4431 aagcggtcgtgtttccagacacagtcacgtcaaattgggtgtttactcccaacattctca 4490
Query: 363 agaccaattggacttgaccaagtctgccttggaattcgtccgtgataagtatccacatgt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4491 agaccaattggacttgaccaagtctgccttggaattcgtccgtgataagtatccacatgt 4550
Query: 423 ctctcaggatttccaatactggagaggtcaactaggtcgttacggtctaacaggtgaagg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4551 ctctcaggatttccaatactggagaggtcaactaggtcgttacggtctaacaggtgaagg 4610
Query: 483 tcaaaccgttcaaatgggtactctttctgaaggtcaaagatcaagagtggtgtttgcatt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4611 tcaaaccgttcaaatgggtactctttctgaaggtcaaagatcaagagtggtgtttgcatt 4670
Query: 543 gcttgcattggaacaaccaaatgtcctactattagatgaacctactaacggtttggatat 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4671 gcttgcattggaacaaccaaatgtcctactattagatgaacctactaacggtttggatat 4730
Query: 603 tccaactattgactctttggctgacgctattaacgaattcaatggtggtgtcgttgttgt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4731 tccaactattgactctttggctgacgctattaacgaattcaatggtggtgtcgttgttgt 4790
Query: 663 ctcgcacgatttcagattgcttgacaagattgcaaaggacattttcgttgtcgaacataa 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4791 ctcgcacgatttcagattgcttgacaagattgcaaaggacattttcgttgtcgaacataa 4850
Query: 723 gactgccaccagatgggatggtagcatcttggattacaagaacaaattggccaagaacgt 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4851 gactgccaccagatgggatggtagcatcttggattacaagaacaaattggccaagaacgt 4910
Query: 783 ggttttgtagattatttaataaatttttatgtacagtcaattctatacattgccttcctg 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4911 ggttttgtagattatttaataaatttttatgtacagtcaattctatacattgccttcctg 4970
Query: 843 aaataattccaaagaatggacaaaactaagatactgcaactagagt-amagacgggac-a 900
|||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |
Sbjct: 4971 aaataattccaaagaatggacaaaactaagatactgcaactagagtaacagacgggacaa 5030
Query: 901 ataatcatggtatta 915
|||||||||||||||
Sbjct: 5031 ataatcatggtatta 5045
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6590
Number of Sequences: 1807
Number of extensions: 6590
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 916
length of database: 10,358,551
effective HSP length: 16
effective length of query: 900
effective length of database: 10,329,639
effective search space: 9296675100
effective search space used: 9296675100
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)